Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKVFASPSRYIQGKDALFQSIEHIKSLG-QTPLILCDDVVYNIVGERFLSYLQ-DDLLPHRVSFNGEASDNEINRVVAVAKEKNSDLIIGLGGGKTIDSAKAIADKVNLPVVIAPTVASTDAPTSALSVIYTDEGAFEKYIFYSKNPDLVLVDTQVIAQAPKRLLASGIADGLATWVEARAVLQKNGIAMAGGRQTLAGVAIAQACERTLFNDSLQALAA--------CDAKVVTKALENVIEANTLLSGLGFESAGLAAAHAIHNGFTALSGDI-HHLTHGEKVAYGTLTQLFLENRPKEEIDRYINLYQAIGMPTTLAELHLGDATYEELLKVGQQATIEGETIHEMPFKISAEDVAAALLTVDRYVSNHQ |
| 1TA9 Chain:A ((64-423)) | -RIFTSPQKYVQGRHAFTRSYMYVKKWATKSAVVLADQNVWNICANKIVDSLSQNGMTVTKLVFGGEASLVELDKLRKQCP-DDTQVIIGVGGGKTMDSAKYIAHSMNLPSIICPTTASSDAATSSLSVIY----QFQKYSFYPLNPNLIFIDTDVIVRAPVRFLISGIGDALSTWVETESVIRSNS--------TSFAGGVASIAGRYIARACKDTLEKYALSAILSNTRGVCTEAFENVVEANTLMSGLGFENGGLAAAHAIHNGMTAIH-GPVHRLMHGEKVAYGTLVQVVLEDWPLEDFNNLASFMAKCHLPITLEELGIPNVTDEELLMVGRATLRPDESIHNMSKKFNPSQIADAIKAVDSYSQKWQ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1TA9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -200306 for 3147 contacts (-63.6/contact) +
2D Compatibility (PS) -37120 + (NN) -14403 + (LL) 624
1D Compatibility (HY) -29600 + (ID) 7600
Total energy: -288405.0 ( -91.64 by residue)
QMean score : 0.569
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