Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MHIKEVSKKTGITSDTIRYYERINLIPPIHRSESGIREFTQNDIDILEFVRYFRGAGVSVESLIDYIHLVEKGDSTIPARLEILKDERDNLEDRLQGLQEALNRLNHKIDNYQNKVVPREQELFDPTTK
2VZ4 Chain:A ((2-105))
YSVGQVAGFAGVTVRTLHHYDDIGLLVPSERSHAGHRRYSDADLDRLQQILFYRELGFPLDEVAALLDD-----------RAHLRRQHELLSARIGKLQKMAAAVEQAME-------------------
General information:
TITO was launched using:
RESULT:
Template:
2VZ4.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -40876 for 591 contacts (-69.2/contact) +
2D Compatibility (PS) -10474 + (NN) -4072 + (LL) 1492
1D Compatibility (HY) -6400 + (ID) 1100
Total energy: -61430.0 ( -103.94 by residue)
QMean score : 0.605
(partial model without unconserved sides chains):
PDB file :
Tito_2VZ4.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2VZ4-query.scw
PDB file :
Tito_Scwrl_2VZ4.pdb
: