Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MVSALLKFDFSVVRHNMAIKLNNNFLIIMGTS----FLLLLAYHIKKEGKEVLSSLFVISNFFDNSTLFFVIIVV-----MRVVAG--TFGGRPLKTLD-GKTTRPTTDKVKGAIFNMIGPFFEGGRVLDLFSGSGSLAIEAISRGMDQAVLVEKDRRAQVVIQENIAMTKSPEQFQLLKMEANRALEQLTGQFDLVLLDPPYAKEEIV-----------------KQIQIMD-SKGLLGDDI-MIVCETDKSVDLPEEIASFGIWKQKIYGISKVTVYVR |
| 1NV8 Chain:A ((18-256)) | ----------------SLIRDCSGKLEGVTETSVLEVLLIVSRVLGIRKEDLFLKD-LGVSPTEEKRILELVEKRASGYPLHYILGEKEFMGLSFLVEEGVFVPRPETEELVELALELIRK-YGIKTVADIGTGSGAIGVSVAKFSDAIVFATDVSSKAVEIARKNAERHGVSDRFFVRKGEFLEPFKEKFASIEMILSNPPYVKSSAHLPKDVLFEPPEALFGGEDGLDFYREFFGRYDTSGKIVLMEIGEDQVEELKKIVSDTVFLKDSAGKYRFLLLN |
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General information:
TITO was launched using:
| RESULT:
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Template: 1NV8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -88453 for 1517 contacts (-58.3/contact) +
2D Compatibility (PS) -22012 + (NN) -10042 + (LL) 1804
1D Compatibility (HY) -4800 + (ID) 1400
Total energy: -124903.0 ( -82.34 by residue)
QMean score : 0.336
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