Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKTITTFENKKVLVLGLARSGE-AAARLLAKLGAIVTVNDGKPFDENPTAQSLLEEGIKVVCGSHPLELLD--EDFCYMIKNPGIPYNNPMVKKALEKQIPVLTEVELAYLVS--ESQLIGITGSNGKTTTTTMIAEVLNAGGQRGL-----LAGNIGFPASEVV----QAADDKDILVMELSSFQLMGV------KEFRPHIAVITNLMPTHLDYHGSFEDYVAAKWNIQNQMSSSDFLVLNFNQGISKELAKT-TKATIVPFSTTEKVDGAYVQ----DKQL--FYKGENIMLVDDIGVPGSHNVENALATIAVAKLAGISNQVIRETLSNFGGVKHRLQSLGKVHGISFYNDSKSTNILATQKALSGFDNTKVILIAGGLDRGNEFDELIPDITGLKHMVVLGESASRVKRAAQKAGVTYSDALDVRDAVHKAYEVAQQGDVILLSPANASWDMYKNFEVRGDEFIDTFESLRGE |
| 3EAG Chain:A ((3-326)) | -------AMKHIHIIGIGGTFMGGLAAIAKEAGFEVSGCDAKMYPPM---STQLEALGIDVYEG-FDAAQLDEFKADVYVIGNVAKRGMDVVEAILNLGLPYISGPQWLSENVLHHHWVLGVAGTHGKTTTASMLAWVLEYAGLAPGFLIGGVPENFGVSARLPQTPRQDPNSQSPFFVIEADEYDTAFFDKRSKFVHYRPRTAVLNNLEFDHADIFADLGAIQTQFHYLVRTVPSEGLIVCNGRQQSLQDTLDKGCWTPVEKFGTEH---GWQAGEANADGSFDVLLDGKTAGR-VKWDLMGRHNRMNALAVIAAARHVGVDIQTACEALGAFKNVKR------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3EAG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -137040 for 2480 contacts (-55.3/contact) +
2D Compatibility (PS) -32763 + (NN) -16069 + (LL) 9980
1D Compatibility (HY) -7200 + (ID) 3200
Total energy: -186292.0 ( -75.12 by residue)
QMean score : 0.486
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