Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --------MIVGEQEARALIKPRPKSSHKGDYGSVLLIGGFYPYGGAIIM-AALACVKTGAGLVTVATQSCNIPSLHSQLPEV-MAFDSDDYKWLEKSIVQSDVIVIGPGLGVSESSRKILN-QTMEKIQSHQSVIIDGSALTLLSEGAFPQTKAKNLVLTPHQK-EWERLSGIAVSQQTKENTQTALKSFPKGTILVAKSSHTRIFQDLDEKEIIVGGPYQ-ATGGMGDTLCGMIAGMLAQFKEASPLDKVSVGVYLHSAIAQELSKEAYVVLPTTISDEIPKE-MARLSK |
| 2R3B Chain:A ((13-295)) | ENLYFQGMRYLSKDILEEVITQRPSDSYKSNFGRVVLIGGNRQYGGAI-IMSTEACINSGAGLTTVITDVKNHGPLHARCPEAMVVG-FEETVLLTNVVEQADVILIGPGLGLDATAQQILKMVLAQHQKQ-QWLIIDGSAITLFSQGNFSLTYPEKVVFTPH-QMEWQRLSHLPIEQQTLANNQRQQAKL--GSTIVLKSHRTTIFHA-GEPFQNTGGNPGMATGGTGDTLAGIIAGFLAQ--FKPTIETIAGAVYLHSLIGDDLAKTDYVVLPTKISQALPTYMKKYAQP |
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General information:
TITO was launched using:
| RESULT:
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Template: 2R3B.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -159442 for 2398 contacts (-66.5/contact) +
2D Compatibility (PS) -29312 + (NN) -11749 + (LL) 588
1D Compatibility (HY) -17200 + (ID) 5600
Total energy: -222715.0 ( -92.88 by residue)
QMean score : 0.567
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