Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
----MSDKKTFEENLQELETIVSRLETGDVA----LEDAIAEFQKGMLIS--KELQR------------TLKEAEETLVKVMQADGTEVEMDT-----
3WX4 Chain:A ((1-98))
MIIDSQSVVQYTFKIDILEKLYKFLPNLYHSIVNELVEELHLENNDFLIGTYKDLSKAGYFYVIPAPGKNIDDVLKTIMIYVHDYEIEDYFELEHHHH
General information:
TITO was launched using:
RESULT:
Template:
3WX4.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -8895 for 358 contacts (-24.8/contact) +
2D Compatibility (PS) -7759 + (NN) -2390 + (LL) 0
1D Compatibility (HY) -5600 + (ID) 500
Total energy: -25144.0 ( -70.23 by residue)
QMean score : 0.461
(partial model without unconserved sides chains):
PDB file :
Tito_3WX4.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3WX4-query.scw
PDB file :
Tito_Scwrl_3WX4.pdb
: