Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MANKQDLIAKVAEATELTKKDSAAAVDAVFAAVADYLAEGEKVQLIGFGNFEVRERAARKGRNPQTGAEIEIAASKVPAFKAGKALKDAVK
1P71 Chain:A ((1-90))
-MNKGELVDAVAEKASVTKKQADAVLTAALETIIEAVSSGDKVTLVGFGSFESRERKAREGRNPKTNEKMEIPATRVPAFSAGKLFREKVA
General information:
TITO was launched using:
RESULT:
Template:
1P71.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -2818 for 477 contacts (-5.9/contact) +
2D Compatibility (PS) -9443 + (NN) 223 + (LL) 208
1D Compatibility (HY) -6400 + (ID) 2050
Total energy: -20280.0 ( -42.52 by residue)
QMean score : 0.436
(partial model without unconserved sides chains):
PDB file :
Tito_1P71.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1P71-query.scw
PDB file :
Tito_Scwrl_1P71.pdb
: