Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDIKAEIQKLAKEIGISKIGFTTADNFDYLEKSLRASVEEGRNSGFEHKVIEDRIYPERLLESAKTIISIGVAYPHKLPQQPQKTSYKRGKITPNSWGLDYHYVVGEKLDRLSKGIEELCRDFPLQQKAMVDTGALVDTAVAQRAGIGFIGKNGLVISKEYGSYMFLGELITNLEIEPDKPVDYDCGDCR-----RCLDACPTSCLIGDG------SMNAKRCLSFQTQDKGMMDIEFRKKIKTVIYGCDICQICCPYNKGINNPLATEIDPELAQPELIPFLSLSNGQFKEKFGMIAGSWRGKNILQRNAIIALANAHDKTAVVKLIEIIDKNNNPIHTATAIWALGEIVKKPNDEILEFMSNLTLKDEDSRKELELIRHKWQF |
| 3GYX Chain:B ((7-62)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SKCDGCKGGEKTACMYICPNDLMILDPEEMKAFNQEPEACW-----------------------ECYSCIKICPQGAITARPYADFAPMGGTCIPLRGSEDIMWTIKFRNGSVKRFKFPIRTTPEGSIKPFEGKPEAGDLENELLFTETALTVPQVALGQKAQIADAETSQCWFDLPCEGGNR------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3GYX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -18900 for 252 contacts (-75.0/contact) +
2D Compatibility (PS) -4781 + (NN) -3963 + (LL) 14616
1D Compatibility (HY) -3200 + (ID) 600
Total energy: -16828.0 ( -66.78 by residue)
QMean score : 0.335
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