Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKQTKKEFILGLTIIITLTLLIMLIFLVMFNKSSNSKLKQTKDRRVLSTSTTRTSSSSHDQKIVEKSLEKKKMVMEQDMELMNAYRLYYDYAHLSLKEVVLAYMSEYGIEKNSVAFSYKNLKTGQRDAMNDTQAMTAGSTYKLPLNMLVVDAVVKGKLSMEERFDITETDYE---YIGEHNNYVAAFSGAMSIDDMQKYSLVYSENTPAYALAERIGGMDSAYSKFGRYGQSKGDIKNIQ---------KNGNKVTTDYYIQVLDYLWKHR----KKYDSLITYLEEA-FPTDYYRALIPSDVVVAQKPGYV--REALNVGAIVK-E-EVPYIVAIYTAGLGG-STQEDSEINGVGLYQLEQLCFVINQWHRVNMN |
| 3P09 Chain:A ((23-284)) | ----------------------------------------------------------------------------------------------QLDDSFKNLENKY---DGKIGIYTLN----TNIKYNESYHFPICSVFKFLLVGAILDYDMHNQGFLDKKIPINQDDIGKLGYAPITA-K-N-VGKTLTISQLNYAAI-LSDSPASNILVRELGGLQNLNKFIKKLGDNDTIITADEPEINYTQPHSNINKTTPKAITKDIYKLAFGNILDKKHKDIFIKYLQDNNTGANRIAFSMPKDWIIGDKTGTCGQYAATNDVAIIWPKNQQPIALGILYTNPNDKNAPSNEEI----IQQAAKLIANDLTNTYK--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3P09.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -102106 for 2049 contacts (-49.8/contact) +
2D Compatibility (PS) -25086 + (NN) -3565 + (LL) 9388
1D Compatibility (HY) -7600 + (ID) 2100
Total energy: -131069.0 ( -63.97 by residue)
QMean score : 0.424
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