Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKIMFVAAEGAPFAKTGGLGDVIGALPKSLSKKGHDVVVVMPYYDMVDQKFGDQIENLMYFYTDVGWRHQYVGVKRLSQDNVTFYFIDNQYYFYRGHVYG-DWDDG-ERFAYFQ----LAALELMEKINFIPDVLHVHDYHTAMIPFLLKEKYHWIQAYNNIRTVFTIHNIEFQGQFGPEMLGDLFGVGAERYEDGTLRWNNCLNWMKAAILYSDRVTTVSPSYANEIKTPEFGKGLDQIMRMEAGKLSGIVNGIDSDLLNPETDAFLPYHFSKSNLEGKIKNKLALQENLGLPQDKNVPLIGIVSRLTD-QKGFDIIASELDNMLQ----QDIQMVILGTGYHHFEETFSYFASRYPEKLSANITF-DLRLAQQIYAASDIFMMPSAFEPCGLSQMMAMRYGSLPLVHEVGGLKDTVVAFNQFDGSGTGFSFNHFSGYWLMQTLKLALEVYNDYPEAWKKLQWQAM--SKDFSWDTACVAYEQLYQQLQ |
| 3FRO Chain:A ((3-430)) | MKVLLLGFEFLPV-KVGGLAEALTAISEALASLGHEVLVFTPSHGRFQGEEIGK------IRVFGE--EVQVKVSYEERGNLRIYRIGGGL-LDSEDVYGPGWDGLIRKAVTFGRASVLLLNDLLRE-EPLPDVVHFHDWHTVFAGALIKK-------YFKIPAVFTIHRLNKSKL-PAFYFHE----AG--LS--ELAPYPDIDPEHTGGYIADIVTTVSRGYLIDEWGF-FR--N------FEGKITYVFNGIDCSFWNESYLTGS-----------RDERKKSLLSKFGM---DEGVTFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQEMRFIIIGKGDPELEGWARSLEEK-HGNVKVITEMLSREFVRELYGSVDFVIIPSYFEPFGLVALEAMCLGAIPIASAVGGLRDIITN-E------TGILVKAGDPGELANAILKALE---LSRSDLSKFRENCKKRAMSFSWEKSAERYVKAYTGSI |
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General information:
TITO was launched using:
| RESULT:
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Template: 3FRO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -246980 for 3523 contacts (-70.1/contact) +
2D Compatibility (PS) -45770 + (NN) -26311 + (LL) 3700
1D Compatibility (HY) -23600 + (ID) 5200
Total energy: -344161.0 ( -97.69 by residue)
QMean score : 0.522
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