Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMITGIINLKKEAGMTSHDAVFKLRKILHTKKIGHGGTLDPDVVGVLPIAVGKATRVIEYMTESGKIYEGEITLGYATSTEDSSGEVISRTPLTQSDLSEDVVDHAMKSFTGPITQVPPMYSAVKVNGKKLYEYARSGEEVERPKRQITISEFRRTSPLYFEKGICRFSFYVSCSKGTYVRTLAVDLGIKLGYASHMSFLKRTSSAGLSITQSLTLEEINEKYK------Q-ED-FSFLLPIEYGVLDLPKVNLTEEDKVEISYGRRILLENEA---------DTLAA-FYENRVIAILEKRGNEFKPHKVLL
2APO Chain:A ((65-321))-KYGVVVVDKPRGPTSHEVSTWVKKILNLDKAGHGGTLDPKVTGVLPVALERATKTIPMWHIPPKEYVCLMHLHR--------------------DASEEDILRVFKEFTGRIYQR----------------------------RIRKIHELELLDKD---G--KDVLFRVKCQSGTYIRKLCEDIGEALGTSAHMQELRRTKSGCFEEKDAVYLQDLLDAYVFWKEDGDEEELRRVIKPMEYGLRHLKKVVVKDSAVDAICHGADVYVRGIAKLSKGIGKGETVLVETLKGEAVAVGKALMNTKEILNADK


General information:
TITO was launched using:
RESULT:

Template: 2APO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -121817 for 1781 contacts (-68.4/contact) +
2D Compatibility (PS) -23456 + (NN) -2554 + (LL) 2888
1D Compatibility (HY) -10800 + (ID) 3750
Total energy: -159489.0 ( -89.55 by residue)
QMean score : 0.422

(partial model without unconserved sides chains):
PDB file : Tito_2APO.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2APO-query.scw
PDB file : Tito_Scwrl_2APO.pdb: