Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNRLREYRIKASISQLALAKSVGVARQTINLIENNKYNPSLDLCIRLAECLQTDLNTLFWDSRHL
2R1J Chain:L ((9-65))
--RIRARRKKLKIRQAALGKMVGVSNVAISQWERSETEPNGENLLALSKALQCSPDYLLKGD---
General information:
TITO was launched using:
RESULT:
Template:
2R1J.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -40132 for 386 contacts (-104.0/contact) +
2D Compatibility (PS) -6199 + (NN) -1783 + (LL) 180
1D Compatibility (HY) -1600 + (ID) 950
Total energy: -50484.0 ( -130.79 by residue)
QMean score : 0.738
(partial model without unconserved sides chains):
PDB file :
Tito_2R1J.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2R1J-query.scw
PDB file :
Tito_Scwrl_2R1J.pdb
: