Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSKKDKKI---------EIQISDAQVTVNGTKVDGYQLV--IGKKIVGQIAELDSKFA----VIKGEQVSGFYKNLDQAMGNIIEEYNLNR------
1HS7 Chain:A ((23-119))
TNQKTKELSNLIETFAEQSRVLEKECTKIGSKRDSKELRYKIETELIPNCTSVRDKIESNILIHQNGKLSADFKNLKTKYQSLQQSYNQRKSLFPLK
General information:
TITO was launched using:
RESULT:
Template:
1HS7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -16349 for 473 contacts (-34.6/contact) +
2D Compatibility (PS) -8030 + (NN) -873 + (LL) 0
1D Compatibility (HY) -2800 + (ID) 750
Total energy: -28802.0 ( -60.89 by residue)
QMean score : 0.434
(partial model without unconserved sides chains):
PDB file :
Tito_1HS7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HS7-query.scw
PDB file :
Tito_Scwrl_1HS7.pdb
: