Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSRKVRRHFTDDFKQQIVDLYNVGRKRSSLIKVYELTPSTFDKWVRQAKTTGSFKSVDNLTDEQRELIELRKHNKELEMQLDILKQAAVIMAQKGK
1RR7 Chain:A ((85-118))
---------------RIWNDF-NGRNVSELTTRYGVTFNTVYKAIRRMRRLK--------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1RR7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -17422 for 188 contacts (-92.7/contact) +
2D Compatibility (PS) -3234 + (NN) 2469 + (LL) 5132
1D Compatibility (HY) -1200 + (ID) 500
Total energy: -14755.0 ( -78.48 by residue)
QMean score : 0.603
(partial model without unconserved sides chains):
PDB file :
Tito_1RR7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1RR7-query.scw
PDB file :
Tito_Scwrl_1RR7.pdb
: