Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -MLNKMKARF---LIGL---GGFAVISFIIMIGYTIGSQSVTKQTEHQIQSEAKRLAVKEKQ--------------------KEKENILSDQLVKEFLTQYYTKEKLGENNHRIKPYMTDSAYSEEVAHQEE---SINQVYKDYLLDYRFEKAETFVNTETNE---------ALAEVSYQVTYVSDASGNQQKSTQTETKTVKLAYSKLSNKLLVNQITIW------------NGKLESLKENKTGSNS--AIPN-IQGTTTMETN-- |
| 2B4L Chain:A ((1-268)) | DENASAAEQVNKTIIGIDPGSGIMSLTDKAMKDYDLNDWTLISASSAAMTATLKKSYDRKKPIIITGWTPHWMFSRYKLKYLDDPKQSYGSAEEIHTITRKGFSKEQPNAAKLLSQFKWTQDEMGEIMIKVEEGEKPAKVAAEYVNKHKDQIAEWTKGVQKVKGDKINLAYVAWDSEIASTNVIGKVLEDLGYEVTLTQVEAGPMWTAIATGSADASLSAWLPNTHKAYAAKYKGKYDDIGTSMTGVKMGLVVPQYMKNVNSIEDLKK |
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General information:
TITO was launched using:
| RESULT:
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Template: 2B4L.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 24862 for 1467 contacts (16.9/contact) +
2D Compatibility (PS) -21862 + (NN) 2258 + (LL) 0
1D Compatibility (HY) 1600 + (ID) 1100
Total energy: 5758.0 ( 3.93 by residue)
QMean score : 0.209
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