Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSEAIIAKKAEQVELIAEKMKAAASIVVVDSRGLTVEQDTNLRRSLRESDVEFKVIKNSILIRAAEKA-------GLEDLKELFVGPSAVAFSNEDVIAPAKVISDFAKDAEA---LEIKGGSVDGKFTSVEEINALAKLPNKEGMLSMLLSVLQAPVRN-----VAYAVKAVAEKDEEVA------------------------------- |
3A1Y Chain:G ((1-284)) | -MAHVAEWKKKEVEELAKLIKSYPVIALVDVSSMPAYPLSQMRRLIRENGGLLRVSRNTLIELAIKKAAKELGKPELEKLVEYIDRGAGILVTNMNPFKLYKFLQQNRQPQPLEVGLDVLAVYEDGIVYTPDVLAIDEQEYIDMLQKAYMHAFNLAVNIAYPTPETIEAIIQKAFLNAKTVAIEAGYITKETIQDIIGRAFRAMLLLAQQLP |
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General information:
TITO was launched using:
| RESULT:
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Template: 3A1Y.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -32007 for 1046 contacts (-30.6/contact) +
2D Compatibility (PS) -18069 + (NN) -7923 + (LL) 208
1D Compatibility (HY) -3200 + (ID) 1450
Total energy: -62441.0 ( -59.70 by residue)
QMean score : 0.373
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