Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKIDILTLFPEMFAPLEHSIVGKAKERGLLEINYHNFRENAEKS-RHVDDEPYGGGQGMLLRAQPIFDTIDKIDAQKARVILLDPAGRTFDQDFAEELSKEDELIFICGHYEGYDERIKS-L----VTDEVSLGDFVLTGGELAAMTMVDATVRLIPEVIGKETSHQDDSFSS-GLLEYPQYTRPYDYLGMTVPDVLMSGHHENIRKWRLEQSLRKTLERRPDLLENYAMTDEERLILEKIKTEIERTDTVNEQNNL
3QUV Chain:A ((5-231))
MKIDVVTIFPEYLQPVRQSLPGKAIDAGLVDVAVHDLRRWTHDVHKSVDDSPYGGGPGMVMKPTVWGDALDEICTSETLLVVPTPAGYPFTQETAWQWSTEDHLVIACGRYEGIDQRVADDAATRMRVREVSIGDYVLNGGEAAALVIIEAVLRLVPGVLGN-----------ASLLEGPSYTRPPSWRGMDVPPVLLSGDHAKIAAWRAEQSRQRTIERRPDLL--------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3QUV.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -134888 for 1472 contacts (-91.6/contact) +
2D Compatibility (PS) -22097 + (NN) -6979 + (LL) 2876
1D Compatibility (HY) -19600 + (ID) 4800
Total energy: -185488.0 ( -126.01 by residue)
QMean score : 0.460
(partial model without unconserved sides chains):
PDB file :
Tito_3QUV.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3QUV-query.scw
PDB file :
Tito_Scwrl_3QUV.pdb
: