Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMPELPEVETVRKGLERLVVNQEIASITIKVPKMVK--TDLNDFMISLPGKTIQQVLRRGKYLLFDFGEMVMVSHLRMEGKYLLFPNKVPDNKHFHLYFKLTNGSTLVYQDVRKFGTFELVRKSSLKDYFTQKKLGPEPTADTFQFEPFSKGLANSKKPIKPLLLDQRLVAGLGNIYVDEVLWAAKIHPQRLANQLTESETSLLHKEIIRILTLGIEKGGSTIRTYKNALGEDGTMQKYLQVYGKTGQPCPRCGCLIKKIKVGGRGTHYCPRCQCL
3GPY Chain:A ((1-272))-PQLPEVETIRRTLLPLIVGKTIEDVRIFWPNIIRHPRDSEAFAARMIGQTVRGLERRGKFLKFLLDRDALISHLRMEGRYAVASALEPLEPHTHVVFCFTDGSELRYRDVRKFGTMHVYAKEEADRRPPLAELGPEPLSPAFSPAVLAERAVKTKRSVKALLLDCTVVAGFGNIYVDESLFRAGILPGRPAASLSSKEIERLHEEMVATIGEAVMKGGSTVRTYVNTQGEAGTFQHHLYVYGRQGNPCKRCGTPIEKTVVAGRGTHYCPRCQR-


General information:
TITO was launched using:
RESULT:

Template: 3GPY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -125483 for 2262 contacts (-55.5/contact) +
2D Compatibility (PS) -28618 + (NN) -11088 + (LL) 264
1D Compatibility (HY) -18400 + (ID) 6000
Total energy: -189325.0 ( -83.70 by residue)
QMean score : 0.517

(partial model without unconserved sides chains):
PDB file : Tito_3GPY.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3GPY-query.scw
PDB file : Tito_Scwrl_3GPY.pdb: