Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQVRLAFPNEIDQIMLLIEEARAEIAKTGSDQWQKEDGYPNRNDIIDDI---LNGYAWVGIE--------DGMLATYAAVIDGHEEVYDAIYEGKWLHDNHRYLTFHRIAISNQFRGRGLAQTFLQGLIE---GHKGPDFRCDTHEKNVTMQHILNKLGYQYCGKVPLDGVRLAYQKIKEKGETSIYREIDERNPM
2B5G Chain:A ((4-152))
FVIRPATAADCSDILRLIKELAKYE----QVILT--E----KDLLEDGFGEHPFYHCLVAEVPKEHWTPEGHSIVGFAMYYFTYDPW------------IGKLLYLEDFFVMSDYRGFGIGSEILKNLSQVAMRCRCSSMHFLVAEWNEPSINFYKRRGASDLSSEEGWRLFKIDKEYLLKMAT------------
General information:
TITO was launched using:
RESULT:
Template:
2B5G.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -54134 for 856 contacts (-63.2/contact) +
2D Compatibility (PS) -14258 + (NN) -5112 + (LL) 1792
1D Compatibility (HY) -6400 + (ID) 900
Total energy: -79012.0 ( -92.30 by residue)
QMean score : 0.370
(partial model without unconserved sides chains):
PDB file :
Tito_2B5G.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2B5G-query.scw
PDB file :
Tito_Scwrl_2B5G.pdb
: