Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MALELLTPFTKVELEEKKRDTNRKQIGIMGGNFNPVHNAHLVVADQVRQQLCLDQVLLMPEFQPPHIDKKETIDEQHRLKMLELAIEGIDGLSIEPIEIERKGISYTYDTMKLLIEKNPDVDYYFIIGADMVEYLPKWHRIDELVKMVQFVGVQRPKYKAGTSYPVIWVDLPLMDISSSMIRQFIKSNRQPNYLLPKEVLDYIRKEGLYK
2QTM Chain:B ((2-188))
-----------------------RKIGIIGGTFDPPHYGHLLIANEVYHALNLEEVWFLPNQIPPHKQGRDITSVESRLQMLELATEAEEHFSICLEELSRKGPSYTYDTMLQLTKKYPDVQFHFIIGGDMVEYLPKWYNIEALLDLVTFVGVARPGYKLRTPYPITTVEIPEFAVSSSLLRERYKEKKTCKYLLPEKVQVYIERNGLYE
General information:
TITO was launched using:
RESULT:
Template:
2QTM.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -160722 for 1453 contacts (-110.6/contact) +
2D Compatibility (PS) -20527 + (NN) -14266 + (LL) 2048
1D Compatibility (HY) -17600 + (ID) 4450
Total energy: -215517.0 ( -148.33 by residue)
QMean score : 0.602
(partial model without unconserved sides chains):
PDB file :
Tito_2QTM.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2QTM-query.scw
PDB file :
Tito_Scwrl_2QTM.pdb
: