Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNSLNGETLLTGLIANPARHSLSPLMWNTSFQEKNMNYAYLTFEVEEGKLTEAVRGVRALGIRGVNVSMPFKQSVIPLLDDLSPQAKLVGAVNTIVNQGGTGRLVGHMTDGIGCFKALAAQGFSAKNKIVTIAGIGGSGKAVAVQAAMEGVAEIRLFNRNSSNYDKVIDLSDKIKKQFQIKVVVDYLENKTAFKDAIRTSHFYIDATSLGMRPLDNYSLINDPEILTPNL-----VVVDLVYKPKETALLRFVRQNGVKHAYNGLGMLIYQGAEAFQLITNQEMPISSVERVLQTEN |
2HK9 Chain:C ((8-268)) | ---INAQTQLYGVIGFPVKHSLSPVFQNALIRYAGLNAVYLAFEINPEELKKAFEGFKALKVKGINVTVPFKEEIIPLLDYVEDTAKEIGAVNTVKFE--NGKAYGYNTDWIGFLKSLKSLIPEVKEKSILVLGAGGASRAVIYALVKEG-AKVFLWNRTK---EKAIKLAQK----FPLEVV-------NSPEEVIDKVQVIVNTTSVGLKD-------EDPEIFNYDLIKKDHVVVDIIY--KETKLLKKAKEKGAK-LLDGLPMLLWQGIEAFKIWNGCEVPYSVAERSVRD-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2HK9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -151052 for 2209 contacts (-68.4/contact) +
2D Compatibility (PS) -27690 + (NN) -11686 + (LL) 1656
1D Compatibility (HY) -23600 + (ID) 5150
Total energy: -217522.0 ( -98.47 by residue)
QMean score : 0.617
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