Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTSKNPDNYMFLMHKISLTTNSGSLTLSGTNGPIIWEPCLDKPTDENNRFNLEKNEFSELKIFEITEEVEETYNDMMKLSWVEAISKSVIDFTNNIEAEKVDLREQQYLISAI-EAWRALSRELGQSN----TIQPYKKTAIKMEDLI------ |
| 2KHM Chain:A ((1-140)) | MASMTGGQQ---------MGRGSMGAASAAVSVGGYGPQSSSAPVASAAASRLSSPAASSRVSSAVSSLVSSGPTN-----QAALSNTISSVVSQVSASNPGLSGCDVLVQALLEVVSALVSILGSSSIGQINYGASAQYTQMVGQSVAQALAG |
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General information:
TITO was launched using:
| RESULT:
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Template: 2KHM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 15346 for 721 contacts (21.3/contact) +
2D Compatibility (PS) -14050 + (NN) -6813 + (LL) 1760
1D Compatibility (HY) 800 + (ID) 800
Total energy: -3757.0 ( -5.21 by residue)
QMean score : 0.278
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