Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKDRYILAVESSCDETSVAILKNDKELLANIIASQVESHKRFGGVVPEVASRHHVEVVTTCFEDALQEAGIVASDLDAVAVTYGPGLVGALLVGMAAAKAFAWANKLPLIPVNHMAGHLMAARDVKELQYPLLALLVSGGHTELVYVSGPGDYKIVGETRDDAVGEAYDKVGRVMGLTYPAGREIDQLAHKGQDTYHFPRAMIKEDHLEFSFSGLKSAFINLHHNAEQKGEALVLEDLCASFQAAVLDILLAKTQKALLKYPVKTLVVAGGVAANQGLRERLATDISP-DIDVVIPPLRLCGDNAGMIALAAAIEFEKENFASLKLNAK-PSLAFEGL |
2IVN Chain:A ((1-320)) | ---MLALGIEGTAHTLGIGIVSE-DKVLANVFD---TLTTEKGGIHPKEAAEHHARLMKPLLRKALSEAGVSLDDIDVIAFSQGPGLGPALRVVATAARALAVKYRKPIVGVNHCIAHVEITKMFGVK-DPVGLYVS-GGNTQVLALEG-GRYRVFGETLDIGIGNAIDVFARELGLGFPGGPKVEKLAEKGEKYIELPYAV---KGMDLSFSGLLTEAIRKYRS-----GKYRVEDLAYSFQETAFAALVEVTERAVAHTEKDEVVLVGGVAANNRLREMLRIMTEDRGIKFFVPPYDLCRDNGAMIAYTGLRMYKAGISFRLEETIVKQKFRTDEV |
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General information:
TITO was launched using:
| RESULT:
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Template: 2IVN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -250371 for 2945 contacts (-85.0/contact) +
2D Compatibility (PS) -34825 + (NN) -17918 + (LL) 988
1D Compatibility (HY) -20400 + (ID) 4900
Total energy: -327426.0 ( -111.18 by residue)
QMean score : 0.550
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