Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MIKIFDTHTHLNVENFEGKIDEEINLASELGVTKMNVVGFDQDTISKSLELSSQYA----QVYSTIGWHPTEAGSYDDNIESMIISHLENPKVIALGEIGLDYYWMEDPKDIQIEVFKRQIELSKEYNLPFVVHTRDALEDTYEVIKESGVGPFG-GIMHSFSGSLEMAQKFIDLGMMISFSGVVTFKK-ALDVQEAARELPLDKILVETDAPYLAPVPKRG----RENKTAYTRYVVEKIAELRGITVEEVAEATYQNAVRIFRLDEKN |
3RCM Chain:A ((1-267)) | -MQLIDIGVNLTNSSFHDQQAAIVERALEAGVTQMLLTGTSLAVSEQALELCQQLDASGAHLFATAGVHPHDAKAWDTDSERQLRLLLSEPRVRAVGECGLDFNRDFSPRPLQEKALEAQLTLAAQLRLPVFLHERDASERLLAILKDYRD-HLTGAVVHCFTGEREALFAYLDLDLHIGITGWICDERRGTHLHPLVGNIPEGRLMLESDAPYLLPRSLRPKPKSGRNEPAFLPEVLREVALHRGESAEHTAAHTTATARDFFQLPAEN |
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General information:
TITO was launched using:
| RESULT:
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Template: 3RCM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -131625 for 2273 contacts (-57.9/contact) +
2D Compatibility (PS) -27912 + (NN) -10842 + (LL) 36
1D Compatibility (HY) -11200 + (ID) 3550
Total energy: -185093.0 ( -81.43 by residue)
QMean score : 0.658
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