Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | ------------MAKFGFLSVLEEELD---KHLQYDFAMDWDKKNHTVEVTFILEAQNSSAIETVDDQGETSSEDIV-FEDYVLFYNPV---KSRFDAEDYLVTI---PYEPKKGLSREF----------LAYFAETLNEVATEGLSDLMDFLT--DDSIEEFGLSWDTDAFENGRAELKETEFYPYPRY |
1Y88 Chain:A ((16-199)) | NLYFQGHMVARLLEEHGFETKTNVIVQGNCVEQEIDVVAERDGERYMIECKFHNIPVYTGLKEAMYTYARFLDVEKHGFTQPWIFTNTKFSEEAKKYAGCVGIKLTGWSYPEKEGIEVLLESKGLYPITILRIDKEVLDELVRAGLVFCRDVVSAGEEKLREIGLS--AKKAREVIAEAKKVIGGS---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1Y88.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -9841 for 968 contacts (-10.2/contact) +
2D Compatibility (PS) -16663 + (NN) -1493 + (LL) 224
1D Compatibility (HY) -2800 + (ID) 1400
Total energy: -31973.0 ( -33.03 by residue)
QMean score : 0.208
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