Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTDNSNIRVVVGMSGGVDSSVTALLLKEQ-GYDVIGVFMKNWDDTDEFGVCTATEDYKDVAAVADQIGIP-YYSVNFEKEYWDRVFEYFLAE--YRAGRTPNPDVMCNKEIKFKAFLDYAMTLGADYVATGHYAQVTRDENGIVHMLRGADNNKDQTYFLSQLSQEQLQKTLFPLGHLQ---KPEVRRIAEEAGLATAKKKDSTGICFIGEKNFKDFLGQYLP--------------------------AQPGRMMTVDGRDMGEHAGLM-YYTIGQRGGLGIGGQHGGDNKPWFVVGKDLSKNILYVGQGFYHDSLMSTSLTASEIHFTRDMPNEFKLECTAKFRYRQPDSKVTVYVKGNQARVVFDDLQRAITPGQAVVFYNEQECLGGGMIDQAYRDDKICQYI |
| 1KOR Chain:A ((1-276)) | ------MKIVLAYSGGLDTSIILKWLKETYRAEVIAFTADIGQG----------EEVEEAREKALRTGASKAIALDLKEEFVRDFVFPMMRAGAVYEGYYLLGTSIA-RPLIAKHLVRIAEEEGAEAIAHGATGKGNDQV--RFEL--TA----------YAL--KPDIKVIAPWREWSFQGRKEMIAYAEAHGIPVP--PYSMDANLLHISYEGGVLEDPWAEPPKGMFRMTQDPEEAPDAPEYVEVEFFEGDPVAVNGERLSPAALLQRLNEIGGRHGVGRVDI----VENRFV---GMKSRGVYETPGGTILYHARRAVESLTLDREVLHQRDMLSPKYAELVYYGFWYAPEREALQAYFDHVARSVTGVARLKLYKGNVYVVGRKAPKSLYRGYDQKDAEGFI |
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General information:
TITO was launched using:
| RESULT:
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Template: 1KOR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -108576 for 1891 contacts (-57.4/contact) +
2D Compatibility (PS) -25710 + (NN) -9408 + (LL) 728
1D Compatibility (HY) -8000 + (ID) 2300
Total energy: -153266.0 ( -81.05 by residue)
QMean score : 0.378
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