Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --------------------------------------------MNRD-------QSDLHIDELLADP-FGGNIEIPGS---------EAVK----AEKEQVRLVDVLPEENKEKAIQLAGQIDHK-----NMQSIV-------------LYGSQAQSKLLNFSHDMINHVQK-------KDVGEIGE-ILGELMKKL-E-QVNPDDLQSK------KKGFLARMFGRVSSSLQEVLSKYQKTSVQIDRISLKLEHSKNALISDN-KLLEQLYEKNKEYF--------------AALNVYIAA-GELKLEELKTKTIPELKQQAESSDHNQMAVQEVNDLIQFADRL-DKRVHDLLL-----------SRQITIQSAPQ-IRLIQNTNQALAEKIQSSIVTAIPLW-KNQVAIALTLLRQRNAVDAQQKVSDTTNELLLKNAELLKTNTIETARANERGLVDI--DTLKKVQESLISTLEETLTIQEEGRIK---RRQAEEELMMMEGDLKQKLITIKER--------------- |
| 3VWA Chain:A ((5-544)) | PLHMSISNFQFPYTIEETAITETALWQCFDGTRKADSLPVTVFKAKRSPENESLILNAVHKSKILKIPGLCTVLETFDSDPQSTFIVTERVVPFPWDNLGSLSQNKFGVELGISQLLATLGFLKNFVLGTLSKDSVFINIKGEWVLFGLELCSSKEGLSAFEFASRARSYYNIIGSQLPCEDPNTIDSMGLGLLIKSLMAPSCLPKDWIVNVNMISDGKITIENFRKRLENTETWRSNPLINFYQELRELHIKDPQGKLVV----MSNLENLYLESREIFRNLTPGMIENFIIPELCEIIKLLMTQSISSNASHKLVPFLAIVLDLTSETNTFPVGFNDLITQSFKLPDRQVRFLLLIYLPKLIGPLSKSEISSRIYPHFIQGLTDSDATLRLQTLKTIPCIVSCLTERQLNNELLRFLAKTQVDSDVEIRTWTVIIISKISTILSTSVGNRSNILATAFTKSLKDPQVKPRLAALYGLEKSIELFDVNTIANKILTVIAPGLLDKSPIVRGRAKILFEEYLEKLEKEAQLIQTN |
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General information:
TITO was launched using:
| RESULT:
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Template: 3VWA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 128262 for 2499 contacts (51.3/contact) +
2D Compatibility (PS) -40152 + (NN) -14763 + (LL) 20
1D Compatibility (HY) 12800 + (ID) 1450
Total energy: 84717.0 ( 33.90 by residue)
QMean score : 0.189
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