Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKFRRSGRLVDLTNYLLTHPHELIPLTFFSERYESAKSSISEDLTIIKQTFEQQGIGTLLTVPGAAGGVKYIPKMKQAEAEEFVQTLGQSLANPERILPGGYVYLTDILGKPSVLSKVGKLFASVFAEREIDVVMTVATKGIPLAYAAASYLNVPVVIVRKDNKVTEGSTVSINYVSGSSNRIQTMSLAKRSMKTGSNVLIIDDFMKAGGTINGMINLLDEFNANVAGIGVLVEAE-GVDERLVD----EYMSLLTLSTINMKEKSIEIQNGNFLRFFKDNLLKNGETES
2DY0 Chain:A ((27-182))
----------------------------------------------------------------------------------------------------LFRDVTSLLEDPKAYALSIDLLVERYKNAGITKVVGTEARGFLFGAPVALGLGVGFVPVRKPGKL-PRETISETYDLEY--GTDQLEIHVDAIKPGDKVLVVDDLLATGGTIEATVKLIRRLGGEVADAAFIINLFDLGGEQRLEKQGITSYSLVPFPG-------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2DY0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -150839 for 1198 contacts (-125.9/contact) +
2D Compatibility (PS) -16077 + (NN) -1568 + (LL) 8600
1D Compatibility (HY) -10400 + (ID) 1700
Total energy: -171984.0 ( -143.56 by residue)
QMean score : 0.593
(partial model without unconserved sides chains):
PDB file :
Tito_2DY0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2DY0-query.scw
PDB file :
Tito_Scwrl_2DY0.pdb
: