Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNNGHLNQILLITDGCSNHGEDPLAMAAFAKEQGITVNVIGIMEENQIDPEAMKEVEGIALAGGGVHQVVYASQLSQTVQMVTKKAMTQTLQGVVNQELKQILGKNVEMEELSPEKRGEVMEVVDELGETVHLQVLVLVDTSASMAPKLPTVKEALIDLSVSLNSRIGNNEFAMCIFPGKKQEVELVLNWTPKLQSLSTLFAKLST-GG-ITPTGPAIREATLQFEKI-------RSRRGMLADDERRFDEFGM |
| 1PT6 Chain:A ((7-123)) | -----------------------------------------------------------------------------------------------------------------------------------QLDIVIVLDGSNSIYP-WDSVTAFLNDLLKRMDIGPKQTQVGIVQYGENVTHEFNLNKYSST-EEVLVAAKKIVQRGGRQTMTALGTDTARKEAFTEARGARRGVKKVMVIVTDGESHD---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1PT6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -35681 for 799 contacts (-44.7/contact) +
2D Compatibility (PS) -11129 + (NN) -805 + (LL) 10516
1D Compatibility (HY) -2800 + (ID) 850
Total energy: -40749.0 ( -51.00 by residue)
QMean score : 0.413
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