Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIYVNGRYMEEKDAVLSPFDHGFLYGIGVFETFRLY-EG---CPFLLDWHIERLERALKDLQIEYTVSKHEILEMLDKLLKLNDIKDGNARVRLNISAGISDKGFVAQTYDKPTVLCFVNQLKPESLPLQKEGKVLSIRR-N--TP-EGSFRLKSH-HYLNNMYAKREIG-NDPRVEGIFLTEDGAVAEGIISNVFWRKGRCIYTPSLDTGILDGVTRRFIIENAKDIGLELKTGRYELEALLTADEAWMTNSVLEIIPFTKIEEVNYGSQSGEATSALQLLYKKEIKNMIHEKGGRAWRSTQ |
| 5CE8 Chain:A ((15-299)) | -VWLDGRLVDEEEAKVTVLSPSLNYGFGVFEGIRAYWNGENLYVFRLRDHMERLLRSAKIIGLDVPYTAEELSKAVVETVRANGF-KEDLYIRPVAYISKPQISLDVRG-LQASVAIAAIPFGKY---LKVEGVRAAVVSWRRVHTSMMPVMAKATGIYLNSIMAAVEARARGY-DEAIMLNAEGKVVEGSGENIFIVRRGVLMTPPLEDGILEGITRETVISIAGDLGIPLLEKSITREELYAADEAFFVGTAAEITPIIEIDGRVLQ--RGPITQKIAETYRRIVLGKEEKY--------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 5CE8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -151421 for 2245 contacts (-67.4/contact) +
2D Compatibility (PS) -29558 + (NN) -7979 + (LL) 864
1D Compatibility (HY) -14400 + (ID) 3500
Total energy: -205994.0 ( -91.76 by residue)
QMean score : 0.610
|
|
|