Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMGHNISDIIEQYLKRVLDQNGKEILEIKRSEIADK-----FQCVPSQINYV--INTRFTSE-----------RGYIVESKRGGGGYIRIIKIKMNNEVVLINN--------------------IISQINTH------------------LSQAASDDIILRLLEDK---VISEREAKMMVSVMDRSVLHIDLPE----RDELRARMMKAMLTSLKLK--------
4LJO Chain:A ((8-223))---------AQGLAMYLQENGIDCPKCKFSYALARGGCMHFHCTQCRHQFCSGCYNAFYAKNKCPEPNCRVKKSLHGHHPRDCLFYLRDWTALRLQKLLQDNNVMFNTEPPAGARAVPGGGCRVIEQKEVPNGLRDEACGKETPAGYAGLCQAHYKEYLVSLINAHSLDPATLYEVEELETATERYLHVRPQPLAGEDPPAYQARLLQKLTEEVPLGQSIPRRRK


General information:
TITO was launched using:
RESULT:

Template: 4LJO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -34375 for 857 contacts (-40.1/contact) +
2D Compatibility (PS) -15043 + (NN) 1009 + (LL) 508
1D Compatibility (HY) -4000 + (ID) 1350
Total energy: -53251.0 ( -62.14 by residue)
QMean score : 0.261

(partial model without unconserved sides chains):
PDB file : Tito_4LJO.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4LJO-query.scw
PDB file : Tito_Scwrl_4LJO.pdb: