Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MGHNISDIIEQYLKRVLDQNGKEILEIKRSEIADK-----FQCVPSQINYV--INTRFTSE-----------RGYIVESKRGGGGYIRIIKIKMNNEVVLINN--------------------IISQINTH------------------LSQAASDDIILRLLEDK---VISEREAKMMVSVMDRSVLHIDLPE----RDELRARMMKAMLTSLKLK-------- |
4LJO Chain:A ((8-223)) | ---------AQGLAMYLQENGIDCPKCKFSYALARGGCMHFHCTQCRHQFCSGCYNAFYAKNKCPEPNCRVKKSLHGHHPRDCLFYLRDWTALRLQKLLQDNNVMFNTEPPAGARAVPGGGCRVIEQKEVPNGLRDEACGKETPAGYAGLCQAHYKEYLVSLINAHSLDPATLYEVEELETATERYLHVRPQPLAGEDPPAYQARLLQKLTEEVPLGQSIPRRRK |
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General information:
TITO was launched using:
| RESULT:
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Template: 4LJO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -34375 for 857 contacts (-40.1/contact) +
2D Compatibility (PS) -15043 + (NN) 1009 + (LL) 508
1D Compatibility (HY) -4000 + (ID) 1350
Total energy: -53251.0 ( -62.14 by residue)
QMean score : 0.261
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