Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLLPKRVKYRREHRGKMRGRAKGGTEVHFG-EFGIQALEASWITNRQIEAARIAMTRYMKRGG-----KVWIKIFPSKPY------T---AKPLEVRMGSGKGAPEGWVAVVKPGKVLFEISGV--SEEVAREALRLASHKLPIKTKFVKREEIGGESNES
5AN9 Chain:F ((40-170))
----------------------KASTDEFPLCVHLISLEKEQLSSEAIEAGRISCNKYISKTGGKDSFHMRVRVHPWHVLRINKMLSCAGADRLQTGMRGAFGKPMGTVARVNIGQIIFSIRTRDNMLANVVEALRRSSYKFPGRQKIVVSKK--------
General information:
TITO was launched using:
RESULT:
Template:
5AN9.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -41220 for 750 contacts (-55.0/contact) +
2D Compatibility (PS) -12583 + (NN) -4421 + (LL) 1648
1D Compatibility (HY) -6000 + (ID) 1600
Total energy: -64176.0 ( -85.57 by residue)
QMean score : 0.360
(partial model without unconserved sides chains):
PDB file :
Tito_5AN9.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-5AN9-query.scw
PDB file :
Tito_Scwrl_5AN9.pdb
: