Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSRVGKKLLEIPSDVTVTLNDNNTVAVKGPKGELTRTFHP-DMEIKVE-DNVLTVARPSDQKEHRALHGTTRSLLGNMVEGVSKGFERGLELVGVGYRASKS----GNKLVLN--VGYSHPVEIVPEEGIEIEVP--SQTKVVVKGTDKERVGAIAANIRAVRSPEPYKGKGIRYEGEVVRRKEGKSAK
5AN9 Chain:B ((2-187))
KVINSSRKVQIPENVTVDVKGRS-VKVTGPRGTLSKSFDHASVDINLVGKKELTVDLWFGNRKQIACIKTITSIIENMITGVTKGYEYKMRFVYAHFPINVAVTDGGRVVEIRNFFGEKIVRRIELLDGITCYRNEKAKDEIVLTGNSLELLSQSCATIQ-LRSAIKYKDVRKFLDGIYVSERNVLES-
General information:
TITO was launched using:
RESULT:
Template:
5AN9.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -10348 for 1253 contacts (-8.3/contact) +
2D Compatibility (PS) -19325 + (NN) -8739 + (LL) 260
1D Compatibility (HY) -11600 + (ID) 2150
Total energy: -51902.0 ( -41.42 by residue)
QMean score : 0.549
(partial model without unconserved sides chains):
PDB file :
Tito_5AN9.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-5AN9-query.scw
PDB file :
Tito_Scwrl_5AN9.pdb
: