Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNLVLMGLPGAGKGTQGERIVEDYGIPHISTGDMFRAAMKEETPLGLEAKSYIDKGELVPDEVTIGIVKERLGKDDCERGFLLDGFPRTVAQAEALEEILEEYGKPIDYVINIEVDKDVLMERLTGRRICSVCGTTYHLVFNPPKTPGICDKDGGELYQRADDNEETVSKRLEVNMKQTQPLLDFYSEKGYLANVNGQQDIQDVYADVKDLLGGLKK
3FB4 Chain:A ((1-215))
MNIVLMGLPGAGKGTQAEQIIEKYEIPHISTGDMFRAAIKNGTELGLKAKSFMDQGNLVPDEVTIGIVHERLSKDDCQKGFLLDGFPRTVAQADALDSLLTDLGKKLDYVLNIKVEQEELMKRLTGRWICKTCGATYHTIFNPPAVEGICDKDGGELYQRIDDKPETVKNRLDVNMKQTQPLLDFYSQKGVLKDIDGQQDIKKVFVDINDLLGGL--
General information:
TITO was launched using:
RESULT:
Template:
3FB4.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -84908 for 1664 contacts (-51.0/contact) +
2D Compatibility (PS) -24042 + (NN) -18936 + (LL) 128
1D Compatibility (HY) -27600 + (ID) 7650
Total energy: -163008.0 ( -97.96 by residue)
QMean score : 0.566
(partial model without unconserved sides chains):
PDB file :
Tito_3FB4.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3FB4-query.scw
PDB file :
Tito_Scwrl_3FB4.pdb
: