Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKSRGLVRFFFSILAVGALITSIVGFALKWGEYRGLFLTFEAGQIFSVLFWFIGVGMIFSVISQMGFFVFLTVHRFALEILRSSSLWNLLQLFFILFVAFDLMYVRFLFFGESGESLAGYAWLPVFLLIFGVITAYIKQKQSSKKTFVSSLFLMVVITALEWFPALRVNDEDWLYLMLFPLMACNAFQLLMLPKFAAK |
| 3K04 Chain:B ((58-95)) | ------------------------------------------GKIFTILYIFIGIGLVF------GF-----IHKLAVNVQLPSILSNLVP----------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3K04.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -15013 for 151 contacts (-99.4/contact) +
2D Compatibility (PS) -3857 + (NN) -687 + (LL) 16180
1D Compatibility (HY) -7200 + (ID) 850
Total energy: -11427.0 ( -75.68 by residue)
QMean score : 0.060
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