Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQNAVIYQPVQIEYLKKTSDLFSEQQLADSFVLIFHLKGNGYISIGTNTNPLQKKTLYVCPPNETFGFTPAADGHIDACIIRLLSYIKETGQDIFTPCTESELAKLKLMNVSHIENLAVRLQELAALWNESSQLSQLKCVIEVQSLIYDLFTASLSDQTDTHSAIEKTKHYIETHADTKITLAQLSQMAGISAKHYSESFKKWTGQSVTEFITKTRITKAKRLMAKSNCKLKEIAHQTGYQDEFYFSRIFKKYTGCSPTSYMKKRRKKIAAYGRGTMGHLIPLHHIPFAAALHPKWT---SYYYQHYSTDIPVQLSAYRFN-EKWEENLYTLSQAEPDVIVSMDS-ISPEEQDRLNRIAEVMYLPSE---ESWRTHFLQTASFLKEESEAEKWLADYDQQTTAAKKTLQHV----QGLRFLFLRLH---KQNFYLAHNRSVREVFFGDLGFSSATTAD-----TPSEQAISLENIANY-QADCMMLFLFKEPETIAYYQQLQQTEAWQNLSAVRDNRVYLLSLDPW----NEYSACGHERIVQQTVSLLSGDCP |
| 4H59 Chain:A ((5-304)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DKIVLDHA-FGQ-TI-LDKKPERVATIAWGNHDVALALGIVPVGFSKANYGVSADKGVLPWTEEKIKELNGKANLFDDLDGLNFEAISNSKPDVILAGYSGITKEDYDTLSKIAPVAAYKSKPWQTLWRDMIKIDSKALGMEKEGDELIKNTEARISKELEKHPEIKGKIKGKKVLFTMINAADTSKFWIYTSKDPRANYLTDLGLVFPESLKEFESEDSFAKEISAEEANKINDADVIITYGDD-----KTLEALQKDPLLGKINAIKNGAVAVIPDNTPLAASCTPTPLSINYTIEEYLNLLGNAC- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4H59.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -148562 for 2279 contacts (-65.2/contact) +
2D Compatibility (PS) -28030 + (NN) 1372 + (LL) 19168
1D Compatibility (HY) -9600 + (ID) 2350
Total energy: -168002.0 ( -73.72 by residue)
QMean score : 0.333
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