Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --------------------------------------------MSCPEQIVQLMHMHLDGDILPKDEHVLNEHLETCEKCRKHFYEMEKSIALVRSTSHVEAPADFTANVMAKL--PKEKKRASVKRWFRT-------HPVIAAAAVFIILMGGGFFNSWHNDHNF-----SVSKQPNLVVHNHTVTVPEGETVKGDVTVKNGK---------LIIKGKIDGDVTVVNGEKYMASAGQVTGQIEEINQLF---DWTWYKMKSAGKSVLDAFNPNGEE---------------------------- |
| 1FFV Chain:C ((1-287)) | MIPPRFEYHAPKSVGEAVALLGQLGSDAKLLAGGHSLLPMMKLRFAQPEHLIDINRIPELRGIREEGSTVVIGAMTVENDLISS--PIVQAR------------LPLLAEAAKLIADPQVRNRGTIGGDIAHGDPGNDHPALSIAVEAHFVLEGPNGRRTVPAD-GFFLGTYMTLLEENEVMVEIRVPAFAQGTGWAYEKLKRK-TGDWATAGCAVVMRKS--GNTVSHIRIALTNVAPTALRAEAAEAALLGKAFTKEAVQAAADAAIAICEPAED-LRGDADYKTAMAGQMVKRALNAAWARCA |
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General information:
TITO was launched using:
| RESULT:
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Template: 1FFV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -38067 for 1371 contacts (-27.8/contact) +
2D Compatibility (PS) -19740 + (NN) -1034 + (LL) 1140
1D Compatibility (HY) -800 + (ID) 1200
Total energy: -59701.0 ( -43.55 by residue)
QMean score : 0.243
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