Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
------------MKKSKGSIESEISKSITQWEKDYL-------GRGSVSVKTDILRDMIIVNLKG-------ILTPAEYVVCGS---KEGMLSIKQTRSEL-------VESGIEGLKDIILKITGEKVKSFHTDLSSRTGERVMVFKLCNDLEKNLEKIL-----
1G2A Chain:A ((1-164))
SVLQVLHIPDERLRKVAKPVE-EVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVIDVSENRDERLVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDRL
General information:
TITO was launched using:
RESULT:
Template:
1G2A.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -11170 for 845 contacts (-13.2/contact) +
2D Compatibility (PS) -12843 + (NN) 3642 + (LL) -28
1D Compatibility (HY) -4800 + (ID) 1200
Total energy: -26399.0 ( -31.24 by residue)
QMean score : 0.173
(partial model without unconserved sides chains):
PDB file :
Tito_1G2A.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1G2A-query.scw
PDB file :
Tito_Scwrl_1G2A.pdb
: