Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMITLFQCLYLILFSFICYQGAAAFSHSTAASWLAAALGAAAAGLYIWNTKRVWKHCSSGLCAWIAVIQVMSVGVVLIGTDIMPVLCVIAIFAGCEGLRIGQSALQARLSDQIDKLTQAEQHANQMLIDVRSRNHDTMKHITAIKSA-Q---PKADTQAYIQNWADQYSQYDRFLKGE---------NAYVAGVLYDFLEKARASNVSVSLHMHTPLSSLPFSPADQVSLVGNILENALDSAAEAREKAEIKLETSL--RSGLYVLTCENSTPGMDPKVLDTIYQSFGRSTKNGAHEGMGTYIIQKLVKGAFGRLDFTYRHPIFRLEIKIPFQK
4QPK Chain:A ((45-242))--------------------------------------------------------------------------------------------------------------------------DLGALLCSRICHDIISPIGAINNGLELLEEGGADEDAMALIKSSARNASARLQFARIAFGAAGVQIDTGDAQNVATEYFRNEKPEFTWEGAR---V--LLPKNKVKLLLNMLLIGNGAIPRG---GSLAVRLEGSDTDPRFVITVKGRMLRVPPKFLELHSG-AAPEEPI-DAHSVQPYYTLLLAEEAGMKISIHATAEDIVFSA------


General information:
TITO was launched using:
RESULT:

Template: 4QPK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 760 -69592 -91.57 -386.62
target 2D structure prediction score : 0.79
Monomeric hydrophicity matching model chain A : 0.54

3D Compatibility (PKB) : -91.57
2D Compatibility (Sec. Struct. Predict.) : 0.79
1D Compatibility (Hydrophobicity) : 0.54
QMean score : 0.337

(partial model without unconserved sides chains):
PDB file : Tito_4QPK.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4QPK-query.scw
PDB file : Tito_Scwrl_4QPK.pdb: