Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMIHLSILDQAPVSKGESPVTTLQHSVELAQLSEQWGYKRYWFAEHHSTKGLASTAPEIMIARIAAQTNTIRVGSGGVLLPQYSPFKVAETFRQLEALYPNRIDLGVGRSPGGTTKTRLALTDG---VKKSLTEFNRQLQDVSYFLTDSLP-PDHPYAGIK------------AAPLI--GTAPELWVLGLG--ENSARRAAHQGIGYVFGHFINPER-GENAFRIYRESFRPSAHF-SNPSALFTIFVICAKTDEEAEELALSQ-DLWLLRVGKG-LD--SRVPSIEEAKAHPYTASDKKLIEENR-KRMVIGSPTTVKQQLLDLTGCY-ETNEIMVLCNV--FDFEAKKESYERLAELFL
4UWM Chain:A ((2-370))AMETGLIFHPYMRPGRSARQTFDWGIKSAVQADSVGIDSMMISEHASQIWENIPNPELLIAAAALQTKNIKFAPMAHLLPHQHPAKLATMIGWLSQILEGRYFLGIGAGAYP--QASYMHGIRNAGTKNLNDMVRESLFIMEKIWKREPFFHEGKYWDAGYPEELEDEQHKLADFSPWGGKAPEIAVTGFSYNSPSMRLAGERNFKPVSIF-SGLDALK-RHWEVYSEAAIEAGHTPDRSRHAVSHTVFCADTDKEAKRLVMEGPIGYCFERYLIPIWRRFGMMDGYAKDAG-ID-PVDADLEFLVDNVFLVGSPDTVTEKINALFEATGGWGTLQVEAHDYYDDPAPWFQSLELISKEVA


General information:
TITO was launched using:
RESULT:

Template: 4UWM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1734 -163878 -94.51 -504.24
target 2D structure prediction score : 0.78
Monomeric hydrophicity matching model chain A : 0.69

3D Compatibility (PKB) : -94.51
2D Compatibility (Sec. Struct. Predict.) : 0.78
1D Compatibility (Hydrophobicity) : 0.69
QMean score : 0.437

(partial model without unconserved sides chains):
PDB file : Tito_4UWM.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4UWM-query.scw
PDB file : Tito_Scwrl_4UWM.pdb: