Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMIKRTVKNIAEMVKGTLANPQYEQTVIHGVATDTRKLEQHQLFIPLKGERFDGHSFVEQAFEAGVAAVLWDRSVPNPPENHAVILVDDTLTALQQLAKAYLQELGTRVIGVTGSNGKTTTKDMIHAVLGTQ-Y---RVHKTGGNFNNHIGLPLTVLAMPENTEIAVLEMGMSAKGEIDLLSRLANPDAAVITNIGESHMQDLGSREGIAEAKLEIINGLKEDGVLIYIGDEPLLQNAY----SCQTKTYGTGT-HNDYQLQDVSQS-EEGTHFTIK--GIENTFFIPILGKHNVMNAMAAIAAGAYFGIAPEDAAKGLSGLKVTGMRLELIKTDSGLSIINDAYNASPTSMKAAIQLTESLEGYGKKMLVLGDMLELGDLEETFHKECGAVISPDKIDRVFTYGKLGAFIAEGALKHFEKDRVSHYTEKKDLLQAVKENASKGDLILFKASRGMKLEEIVKDLIESPLS
4CVK Chain:A ((3-451))-EPLRLSQLTVALDARLIG---EDAVFSAVSTDSRAIGPGELFIALSGPRFDGHDYLAEVAAKGAVAALVEREVA---APLPQLLVRDTRAALGRLGALNRRKFTGPLAAMTGSSGKTTVKEMLASILRTQAGDAESVLATRGNLNNDLGVPLTLLQLAPQHRSAVIELGASRIGEIAYTVELTRPHVAIITNA-------FGGPEKIVEAKGEILEGLAADGTAVLNLDDKAFDTWKARASGRPLLTFSLDRPQADFRAADLQRDARGCMGFRLQGVAGEAQVQLNLLGRHNVANALAAAAAAHALGVPLDGIVAGLQALQPVKGRAVAQLTASGLRVIDDSYNANPASMLAAIDILSGFS--GRTVLVLGDMG-----AEQAHREVGAYAAGK-VSALYAVGPLMAHAVQAFGA-----TGRHFADQASLIGALA-TEDPTTTILIKGSRSAAMDKVVAALC-----


General information:
TITO was launched using:
RESULT:

Template: 4CVK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 2500 -309353 -123.74 -729.61
target 2D structure prediction score : 0.58
Monomeric hydrophicity matching model chain A : 0.77

3D Compatibility (PKB) : -123.74
2D Compatibility (Sec. Struct. Predict.) : 0.58
1D Compatibility (Hydrophobicity) : 0.77
QMean score : 0.567

(partial model without unconserved sides chains):
PDB file : Tito_4CVK.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4CVK-query.scw
PDB file : Tito_Scwrl_4CVK.pdb: