Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTNFILNENKQLSLAIEDENIENFYIDGTDLVRKIIRRSGSGVTSRVPVLSTQDLENKNLHELYDESWLRMKNRPNTELTTESINIADLFSGCGGLSLGVWEACRALGINP-RFSFACDLNEAALSVYEKNFSPDFSLNESIEKHINGEL-GAPLTVEEQRIKDKVKKIDFILAGPPCQGHSDLNNHTRR--KDPRNALLMRVSRVIELFQPSSVLVENVPGIIHDKSG-SFKEFKNHLKTQGYYFDEIVLNAEKLGVSQARRRYFIFASKTPVSSLNQINEFYS----------------------------TNSRPISWAISDLVENVGDDIFNT----------------------------ASEHSLENKRRIEYLFE---NNLFELPNSE------------RPDCH-------------------------------------------RLKPHSYKSVYGRMYWDRPAPTITRGFGST-GQGRFVHSLLKRTITPHEAARIQFFPDFFNFGDLRRRQYQDVIGNAVPSKLSYLLALHQLR
3SWR Chain:A ((537-996))-------------------------------------------------------------------------------KLPKLRTLDVFSGCGGLSEGFHQA------GISDTLWAIEMWDPAAQAFRLNNPGSTVFTEDCNILLKLVMAGETTNSR-GQRLPQKGDVEMLCGGPPCQGFSGMNRFNSRTYSKFKNSLVVSFLSYCDYYRPRFFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAAAPGEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSNITRLSSGPFRTITVRDTMSDLPEVRNGASALEISYNGEPQSWFQRQLRGAQYQPILRDHICKDMSALVAARMRHIPLAPGSDWRDLPNIEVRLSDGTMARKLRYTHHDRKNGRSSSGALRGVCSCVEAGKACDPAARQFNTLIPWCLPHTGNRHNHWAGLYGRLEWDGFFSTTVTNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDTYRLFGNILDKHRQ-VGNAVPPPLAKAIGLEIKL


General information:
TITO was launched using:
RESULT:

Template: 3SWR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1851 -133141 -71.93 -391.59
target 2D structure prediction score : 0.54
Monomeric hydrophicity matching model chain A : 0.64

3D Compatibility (PKB) : -71.93
2D Compatibility (Sec. Struct. Predict.) : 0.54
1D Compatibility (Hydrophobicity) : 0.64
QMean score : 0.354

(partial model without unconserved sides chains):
PDB file : Tito_3SWR.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3SWR-query.scw
PDB file : Tito_Scwrl_3SWR.pdb: