Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence------MIHKHETRELVAIEELVMSWIEAFKSLSYFGIFLALSIEFIPAEVVLPLAGYWVSKGDMTLAGVVLAGSLGGVAGPLTLYWIGRYGGRPFLERFGKYLFIKPEALDKSDNFFKKHGGFVAFSGRFLPGIRTLISIPC---GIAKMNVWVFSLYTFIAMLPITFVYVYLGVKLGENWKAVGSILDQYMLPIGIAILALFLLYLLMKKRKK-----RTHSEQLSVFLKNKR--------
4OHC Chain:A ((10-230))TGYDRQSISDTTAKILLEVQAVHFNAEKPFIFTSGWASPVYIDCRKLISY-------PRVRRALMEMAETTITRDIG--FEQIDAVAGGETAGIPFAAWIADRMMVPMQYVRKKP---KGFGRNAQIEGHLEEGSRVLLVEDLTTDSRSKIN-FVNALRTAGATVNHCFVLFHYNI-----FKESVSVLK----DIDVDLHALATWWDVLRVAKASGYFETKTLDEVEKFLHAPAEWSAAHGG


General information:
TITO was launched using:
RESULT:

Template: 4OHC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 984 -177731 -180.62 -893.12
target 2D structure prediction score : 0.42
Monomeric hydrophicity matching model chain A : 0.65

3D Compatibility (PKB) : -180.62
2D Compatibility (Sec. Struct. Predict.) : 0.42
1D Compatibility (Hydrophobicity) : 0.65
QMean score : 0.292

(partial model without unconserved sides chains):
PDB file : Tito_4OHC.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4OHC-query.scw
PDB file : Tito_Scwrl_4OHC.pdb: