Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNKHKKIPLRKCVVTGEMKPKKELIRVVRSKEGEISVDPTGKKNGRGAYLTLDKECILAAKKKNTLQNQFQSQIDDQIFDELLELAEKVKK
4RT4 Chain:E ((480-500))--------------------------------------------------------------------LYKEQIAEDIVWDIIDELEQI--


General information:
TITO was launched using:
RESULT:

Template: 4RT4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain E - contact count / total energy / energy per contact / energy per residue : 4 -1 -0.13 -0.02
target 2D structure prediction score : 0.76
Monomeric hydrophicity matching model chain E : 0.65

3D Compatibility (PKB) : -0.13
2D Compatibility (Sec. Struct. Predict.) : 0.76
1D Compatibility (Hydrophobicity) : 0.65
QMean score : 0.629

(partial model without unconserved sides chains):
PDB file : Tito_4RT4.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4RT4-query.scw
PDB file : Tito_Scwrl_4RT4.pdb: