Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSMAYEEYMRQLVVPMRRELTGAGFEELTTAEEVENFME--KAEGTTLVVVNSVC-GCAAGLARPAATQAVLQNDKTPDNTVTVFAGQDKEA--TAKMREYFTGQEPSSPSMALLKGKEVVHFIPRHEIEGHDMEEIMKNLTAAFDAHC
2PU9 Chain:C ((6-109))-----------------------KVTEV-NKDTFWPIVKAAGDKPVVLDMFTQWCGPSKAM--APKYEKLAEE---YLD---VIFLKLDCNQENKTLAKEL--G-IRVVPTFKILKENSVVG-----EVTGAKYDKLLEAIQAA-----


General information:
TITO was launched using:
RESULT:

Template: 2PU9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain C - contact count / total energy / energy per contact / energy per residue : 410 4319 10.53 43.63
target 2D structure prediction score : 0.58
Monomeric hydrophicity matching model chain C : 0.66

3D Compatibility (PKB) : 10.53
2D Compatibility (Sec. Struct. Predict.) : 0.58
1D Compatibility (Hydrophobicity) : 0.66
QMean score : 0.458

(partial model without unconserved sides chains):
PDB file : Tito_2PU9.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2PU9-query.scw
PDB file : Tito_Scwrl_2PU9.pdb: