Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKTLHVQTASSSYPVFIGQGIRKKACELLTSLNRPLTRIMFVTDEEVDRLYGDEMLHLLQEKW----PVKKVTV---PSGEQAKSMDMYTKLQSEAIRFH--MDRSSCIIAFGGGVVGDLAGFVAATFMRGIDFIQMPTTLLAH-DSAVGGKVAVNHPLGKNLIGAFYQPKAVLYDTDFLRSLPEKELRSGMAEVIKHAFIYDR---AFLEELLNIHSL-----RDITNDQ---------LNDMIFKGISIKASVVQQDEKEEGIRAYLNFGHTLGHAVEAEYGYGQITHGDAVALGM----QFALYIS-EKTVGCEMDRKRLVSWLKSLGYPSQIR----------KETETSVLLNRMMNDKKTRGGKIQFIVLNELGKVADHTFSRNELESWLNKWRLEETS
1NVB Chain:B ((37-372))------------------------------------TTYVLVTDTNIGSIYTPSFEEAFRKRAAEITPSPRLLIYNRPPGEVSKSRQTKADIEDWMLSQNPPCGRDTVVIALGGGVIGDLTGFVASTYMRGVRYVQVPTTLLAMVDSSIGGKTAIDTPLGKNLIGAIWQPTKIYIDLEFLETLPVREFINGMAEVIKTAAISSEEEFTALEE--NAETILKAVRREVTPGEHRFEGTEEILKARILASARHKAYVVSADEREGGLRNLLNWGHSIGHAIEAIL-TPQILHGECVAIGMVKEAELARHLGILKGVAV----SRIVKCLAAYGLPTSLKDARIRKLTAGKHCSVDQLMFNMALDKKNDGPKKKIVLLSAIG-------------------------


General information:
TITO was launched using:
RESULT:

Template: 1NVB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1474 -15532 -10.54 -52.83
target 2D structure prediction score : 0.56
Monomeric hydrophicity matching model chain B : 0.76

3D Compatibility (PKB) : -10.54
2D Compatibility (Sec. Struct. Predict.) : 0.56
1D Compatibility (Hydrophobicity) : 0.76
QMean score : 0.496

(partial model without unconserved sides chains):
PDB file : Tito_1NVB.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1NVB-query.scw
PDB file : Tito_Scwrl_1NVB.pdb: