Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSTIELNKRQEHILQIVKENGPITGEHIAEKLNLTRATLRPDLAILTMSGFLEARPRVGYFYTGKTGTQLLADKLKKLQVKDFQSI-PVVIHENVSVYDAICTMFLEDVGTLFVVDRDAVLVGVLSRKDLLRASIGQQELTSVPVHIIMTRMPNITVCRREDYVMDIAKHLIEKQIDALPVIKDTDKGFEVIGRVTKTNMTKILVSLSENEIL
3KPB Chain:A ((3-119))-------------------------------------------------------------------------------VKDILSKPPITAHSNISIMEAAKILIKHNINHLPIVDEHGKLVGIITSWDIAKALAQ----NKKTIEEIMTR--NVITAHEDEPVDHVAIKMSKYNISGVPVVDDY---RRVVGIVTSEDISRLFG--------


General information:
TITO was launched using:
RESULT:

Template: 3KPB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 507 -52814 -104.17 -455.29
target 2D structure prediction score : 0.53
Monomeric hydrophicity matching model chain A : 0.67

3D Compatibility (PKB) : -104.17
2D Compatibility (Sec. Struct. Predict.) : 0.53
1D Compatibility (Hydrophobicity) : 0.67
QMean score : 0.558

(partial model without unconserved sides chains):
PDB file : Tito_3KPB.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3KPB-query.scw
PDB file : Tito_Scwrl_3KPB.pdb: