Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMYDTIVIGAGQAGISIGYYLKQSDQKFIILDKSHEVGESWKDRYDSLVLFTSRMYSSLPGMHLEGEKHGFPSKNEIVAYLKKYVKKFEIPI--QLRTEVISVLKIKNYFLIKTNREEYQTKNLVIATGPFHTPNIPSISKDLSDNINQLHSSQYKNSKQLAYGNVLVVGGGNSGAQIAVELSKERVTYLACSNKLVYFPLMIGKRSIFWWFDKLGVLHASHTSIVGKFIQKKGDPVFGHELKHAIKQKEIILKKR---VIAAKQNEIIFK-------DSSTLEVNNIIWATGFRNPLCWINIKGVLDQEGRI-IHHRGVS--PVEGLYFIGLPWQHKRGSALLQGVGNDAEYIVKQMNGE
4C5O Chain:A ((5-348))--DVVVIGGGQSGLSAGYFLRRS-LSYVILDAEASPGGAWQHAWHSLHLFSPAGWSSIPGWPMPASQGPYPARAEVLAYLAQYEQKYALPVLRPIRVQRVSHFGER-RVVARDGR-QW-ARAVISATGTWGEAYTPEYQGLESFAGIQLHSAHYSTPAPFAGMRVAIIGGGNSGAQILAEVSTVAETTWITRTEPAFLADDVDGRVLF-----------ER----------------------DIVMVPPVLDARARGVLAAVPPPARFSPTGMQWADGTERAFDAVIWCTGFRPALSHLKGLDLVTPQGQVEVDGSGLRALAVPSVWLLGYGDWNGMASATLIGVTRYAREAVRQVT--


General information:
TITO was launched using:
RESULT:

Template: 4C5O.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1648 -48817 -29.62 -160.58
target 2D structure prediction score : 0.52
Monomeric hydrophicity matching model chain A : 0.73

3D Compatibility (PKB) : -29.62
2D Compatibility (Sec. Struct. Predict.) : 0.52
1D Compatibility (Hydrophobicity) : 0.73
QMean score : 0.472

(partial model without unconserved sides chains):
PDB file : Tito_4C5O.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4C5O-query.scw
PDB file : Tito_Scwrl_4C5O.pdb: