Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMMTGTLGTLVPIILMFAVLYFLLIRPQQKQQKAVRQMQEELKKGDSVVTIGGLHGTVDSIDESKVVIKTGDNTRLTFDRRAIREVSAAE
4NL2 Chain:D ((33-67))----------------------------------------------------LRGRVVSFDNFTVLLDVE-GKQQLVFKHAISTFSPQ-


General information:
TITO was launched using:
RESULT:

Template: 4NL2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain D - contact count / total energy / energy per contact / energy per residue : 81 -14993 -185.10 -428.37
target 2D structure prediction score : 0.63
Monomeric hydrophicity matching model chain D : 0.57

3D Compatibility (PKB) : -185.10
2D Compatibility (Sec. Struct. Predict.) : 0.63
1D Compatibility (Hydrophobicity) : 0.57
QMean score : 0.865

(partial model without unconserved sides chains):
PDB file : Tito_4NL2.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4NL2-query.scw
PDB file : Tito_Scwrl_4NL2.pdb: