Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKKITFIGAGSTIFAKNVLGDCLLTEALNGFEFALYDIDPKRLQESQLMLENLRDRYNPSVAINSYDDRKLALQNAGYVINAIQVGGYKPSTVIDFEIPKRYGLRQTIADTVGIGGIFRSLRTIPVLFDIAKDMEEMCPDAWFLNYTNPMATLTGAMLRY-TNIKTIGLCHSVQVCTKDLFKALGME-HDGIEERIAGINHMAWLLEVKK-DGTDLYPEIKRRAKEKQ---K-TK-HHDMVRFELM-DKFGYYVTESSEHNAEYHPYFIKRNYPELISEL--QIPLDEYPRRC-VKQ-IENWEKMRDDIVNNK-NLTHERSKEYGSRIIEAMETNEPFTFGGNVLNTGLITNLPSKAVVEVTCVADRKKITPCFAGELPEQLAALNRTNINTQLMTIEAAVTRKKEAVYQAAMLDPHTSAELSMKDIISMCDDLFAAHGDWLPEYK
1U8X Chain:X ((28-465))SFSIVIAGGGSTFTPGIVLMLLDHLEEFPIRKLKLYDNDKERQDRIAGACDVFIREKAPDIEFAATTDPEEAFTDVDFVMAHIRVGKYAMRA-LDEQIPLKYGVV--GQETCGPGGIAYGMRSIGGVLEILDYMEKYSPDAWMLNYSNPAAIVAEATRRLRPNSKILNICDMPVGIEDRMAQILGLSSRKEMKVRYYGLNHFGWWTSIQDQEGNDLMPKLKEHVSQYGYIPKTSWNDTFAKARDVQAADPDTLPN-------TYLQYYLFPDD--MVKKSNPNHTRANEVMEGREAFIFSQCDMITREQSSENSEIKIDDHASYIVDLARAIAYNTGERMLLIVENNGAIANFDPTAMVEVPCIVGSNGPEPITVGTIPQFQKGLMEQQVSVEKLTVEAWAEKSFQKLWQALILSKTVP---NARVARLILEDLVEANKDFWPELD


General information:
TITO was launched using:
RESULT:

Template: 1U8X.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain X - contact count / total energy / energy per contact / energy per residue : 2389 -71664 -30.00 -171.86
target 2D structure prediction score : 0.67
Monomeric hydrophicity matching model chain X : 0.72

3D Compatibility (PKB) : -30.00
2D Compatibility (Sec. Struct. Predict.) : 0.67
1D Compatibility (Hydrophobicity) : 0.72
QMean score : 0.485

(partial model without unconserved sides chains):
PDB file : Tito_1U8X.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1U8X-query.scw
PDB file : Tito_Scwrl_1U8X.pdb: